Genetic diversity assessment of Diplocyclos palmatus (L.) C. Jeffrey from India using internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA

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dc.contributor.authorM A Ali-
dc.contributor.authorF M A Al-Hemaid-
dc.contributor.authorJoongku Lee-
dc.contributor.authorR K Choudhary-
dc.contributor.authorN A Al-Harbi-
dc.contributor.authorSoo Yong Kim-
dc.date.accessioned2017-04-19T09:26:26Z-
dc.date.available2017-04-19T09:26:26Z-
dc.date.issued2011-
dc.identifier.issn1684-5315-
dc.identifier.uri10.5897/AJB10.2002ko
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/10441-
dc.description.abstractInternal transcribed spacer (ITS) region of nuclear ribosomal DNA from 20 populations of Diplocyclos palmatus (L.) C. Jeffrey belonging to five different geographical locations (Bihar, Jharkhand, Maharashtra, Madhya Pradesh, and Tamil Nadu) of India were sequenced. Analysis of nucleotide sequences reveals polymorphism among the populations [π = 0.01482, θw = 0.01180 (0.00236) and total variance 3.260]. AMOVA was used to partition the genetic diversity and tested whether there is any hierarchy of ITS sequence variation among individuals. The genetic differentiation between the populations is high (ΦST = 0.591). The maximum likelihood tree reveals the evolution of D. palmatus under reproductive isolation and under different environmental conditions which may be most probably due to long distance distribution, and possibility of genetic exchange among the populations of D. palmatus distributed in Bihar and Jharkhnad.-
dc.publisherAcademic Journalsko
dc.titleGenetic diversity assessment of Diplocyclos palmatus (L.) C. Jeffrey from India using internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA-
dc.title.alternativeGenetic diversity assessment of Diplocyclos palmatus (L.) C. Jeffrey from India using internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA-
dc.typeArticle-
dc.citation.titleAfrican Journal of Biotechnology-
dc.citation.number72-
dc.citation.endPage16151-
dc.citation.startPage16145-
dc.citation.volume10-
dc.contributor.affiliatedAuthorJoongku Lee-
dc.contributor.affiliatedAuthorSoo Yong Kim-
dc.contributor.alternativeNameAli-
dc.contributor.alternativeNameAl-Hemaid-
dc.contributor.alternativeName이중구-
dc.contributor.alternativeNameChoudhary-
dc.contributor.alternativeNameAl-Harbi-
dc.contributor.alternativeName김수용-
dc.identifier.bibliographicCitationAfrican Journal of Biotechnology, vol. 10, no. 72, pp. 16145-16151-
dc.identifier.doi10.5897/AJB10.2002-
dc.subject.keywordDiplocyclos palmatus (L.) C. Jeffrey-
dc.subject.keywordGenetic diversity-
dc.subject.keywordInternal transcribed spacer (ITS)-
dc.subject.keywordnrDNA-
dc.subject.localDiplocyclos palmatus (L.) C. Jeffrey-
dc.subject.localgenetic diversity-
dc.subject.localGenetic diversity-
dc.subject.localInternal transcribed spacer (ITS)-
dc.subject.localInternal transcribed spacer-
dc.subject.localinternal transcribed spacer (ITS)-
dc.subject.localnrDNA-
dc.subject.localNrDNA-
dc.subject.localNrdna-
dc.description.journalClassN-
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Ochang Branch Institute > Division of National Bio-Infrastructure > International Biological Material Research Center > 1. Journal Articles
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