Bacterial genome mapper: a comparative bacterial genome mapping tool

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Title
Bacterial genome mapper: a comparative bacterial genome mapping tool
Author(s)
Kang Seon Lee; Ryong Nam Kim; Byoung Ha Yoon; Dae Soo Kim; Sang Haeng Choi; Dong Wook Kim; Seong Hyeuk Nam; Aeri Kim; Aram Kang; Kun Hyang Park; Jae Eun Jung; S H Chae; Hong-Seog Park
Bibliographic Citation
Bioinformation, vol. 8, no. 11, pp. 532-534
Publication Year
2012
Abstract
Recently, next generation sequencing (NGS) technologies have led to a revolutionary increase in sequencing speed and costefficacy. Consequently, a vast number of contigs from many recently sequenced bacterial genomes remain to be accurately mapped and annotated, requiring the development of more convenient bioinformatics programs. In this paper, we present a newly developed web-based bioinformatics program, Bacterial Genome Mapper, which is suitable for mapping and annotating contigs that have been assembled from bacterial genome sequence raw data. By constructing a multiple alignment map between target contig sequences and two reference bacterial genome sequences, this program also provides very useful comparative genomics analysis of draft bacterial genomes.
Keyword
bacterial genomecontig mapping program
ISSN
0973-2063
Publisher
Biomedical Informatics Publishing Group
DOI
http://dx.doi.org/10.6026/97320630008532
Type
Article
Appears in Collections:
Division of Research on National Challenges > Environmental diseases research center > 1. Journal Articles
Division of Bio Technology Innovation > Core Facility Management Center > 1. Journal Articles
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