The effect of Zn2+ on Pelodiscus sinensis creatine kinase: unfolding and aggregation studies

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dc.contributor.authorS F Wang-
dc.contributor.authorJinhyuk Lee-
dc.contributor.authorW Wang-
dc.contributor.authorY X Si-
dc.contributor.authorC Li-
dc.contributor.authorT R Kim-
dc.contributor.authorJ M Yang-
dc.contributor.authorS J Yin-
dc.contributor.authorG Y Qian-
dc.date.accessioned2017-04-19T09:46:14Z-
dc.date.available2017-04-19T09:46:14Z-
dc.date.issued2013-
dc.identifier.issn0739-1102-
dc.identifier.uri10.1080/07391102.2012.706074ko
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/11643-
dc.description.abstractWe studied the effects of Zn2+ on creatine kinase from the Chinese soft-shelled turtle, Pelodiscus sinensis (PSCK). Zn2+ inactivated the activity of PSCK (IC50 =.079 ±.004 mM) following first-order kinetics consistent with multiple phases. The spectrofluorimetry results showed that Zn2+ induced significant tertiary structural changes of PSCK with exposure to hydrophobic surfaces and that Zn2+ directly induced PSCK aggregation. The addition of osmolytes such as glycine, proline, and liquaemin successfully blocked PSCK aggregation, recovering the conformation and activity of PSCK. We measured the ORF gene sequence of PSCK by rapid amplification of cDNA end and simulated the 3D structure of PSCK. The results of molecular dynamics simulations showed that eight Zn2+ bind to PSCK and one Zn2+ is predicted to bind in a plausible active site of creatine and ATP. The interaction of Zn 2+ with the active site could mostly block the activity of PSCK. Our study provides important insight into the action of Zn2+ on PSCK as well as more insights into the PSCK folding and ligand-binding mechanisms, which could provide important insight into the metabolic enzymes of P. sinensis.-
dc.publisherT&F (Taylor & Francis)-
dc.titleThe effect of Zn2+ on Pelodiscus sinensis creatine kinase: unfolding and aggregation studies-
dc.title.alternativeThe effect of Zn2+ on Pelodiscus sinensis creatine kinase: unfolding and aggregation studies-
dc.typeArticle-
dc.citation.titleJournal of Biomolecular Structure & Dynamics-
dc.citation.number6-
dc.citation.endPage590-
dc.citation.startPage572-
dc.citation.volume31-
dc.contributor.affiliatedAuthorJinhyuk Lee-
dc.contributor.alternativeNameWang-
dc.contributor.alternativeName이진혁-
dc.contributor.alternativeNameWang-
dc.contributor.alternativeNameSi-
dc.contributor.alternativeNameLi-
dc.contributor.alternativeName김태래-
dc.contributor.alternativeName양준모-
dc.contributor.alternativeNameYin-
dc.contributor.alternativeNameQian-
dc.identifier.bibliographicCitationJournal of Biomolecular Structure & Dynamics, vol. 31, no. 6, pp. 572-590-
dc.identifier.doi10.1080/07391102.2012.706074-
dc.subject.keywordaggregation-
dc.subject.keywordChinese soft-shelled turtle-
dc.subject.keywordcreatine kinase-
dc.subject.keywordmolecular dynamics-
dc.subject.keywordosmolytes-
dc.subject.keywordPelodiscus sinensis-
dc.subject.keywordRACE-
dc.subject.keywordunfolding-
dc.subject.keywordZn2+-
dc.subject.localAggregation-
dc.subject.localaggregation-
dc.subject.localChinese soft-shelled turtle-
dc.subject.localCreatine kinase-
dc.subject.localcreatine kinase-
dc.subject.localMolecular dynamics-
dc.subject.localmolecular dynamics-
dc.subject.localosmolytes-
dc.subject.localOsmolyte-
dc.subject.localOsmolytes-
dc.subject.localPelodiscus sinensis-
dc.subject.localRACE-
dc.subject.localunfolding-
dc.subject.localUnfolding-
dc.subject.localZn2+-
dc.description.journalClassY-
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Synthetic Biology and Bioengineering Research Institute > Genome Editing Research Center > 1. Journal Articles
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