Effects of water stress on chemical composition of rice grains = 수분 스트레스가 벼의 성분에 미치는 영향

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Title
Effects of water stress on chemical composition of rice grains = 수분 스트레스가 벼의 성분에 미치는 영향
Author(s)
Kyong Hee Nam; Chang-Gi Kim
Bibliographic Citation
Journal of Agricultural Science, vol. 42, no. 1, pp. 1-5
Publication Year
2015
Abstract
Deep sequencing of small RNAs has become a routine process in recent years, but no dedicated viewer is as yet available to explore the sequence features simultaneously along with secondary structure and gene expression of microRNA (miRNA). We present a highly interactive application that visualizes the sequence alignment, secondary structure and normalized read counts in synchronousmultipanel windows. This helps users to easily examine the relationships between the structure of precursor and the sequences and abundance of final products and thereby will facilitate the studies on miRNA biogenesis and regulation. The project manager handles multiple samples of multiple groups. The read alignment is imported in BAM file format. Implemented features comprise sorting, zooming, highlighting, editing, filtering, saving, exporting, etc. Currently, miRseqViewer supports 84 organisms whose annotation is available at miRBase.
Keyword
CompositionDroughtRainout shelterRice
ISSN
1225-2220
Publisher
South Korea
DOI
http://dx.doi.org/10.7744/cnujas.2015.42.1.001
Type
Article
Appears in Collections:
Ochang Branch Institute > Division of Bioinfrastructure > Bio-Evaluation Center > 1. Journal Articles
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