Complete genome of brown algal polysaccharides-degrading Pseudoalteromonas issachenkonii KCTC 12958T (= KMM 3549T)

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Title
Complete genome of brown algal polysaccharides-degrading Pseudoalteromonas issachenkonii KCTC 12958T (= KMM 3549T)
Author(s)
Sang-Heon Lee; Hanna ChoeSong-Gun KimDoo-Sang Park; A Nasir; B K Kim; Kyung Mo Kim
Bibliographic Citation
Journal of Biotechnology, vol. 219, pp. 86-87
Publication Year
2016
Abstract
Pseudoalteromonas issachenkonii is a Gram-negative, rod-shaped, flagellated, aerobic, chemoorganotrophic marine bacterium that was isolated from the thallus of Fucus evanescens (marine brown macroalgae) sampled from the Kraternaya Bight of the Kurile Islands in the Pacific Ocean. Here, we report the complete genome of P. issachenkonii KCTC 12958T (= KMM 3549T=LMG 19697T=CIP 106858T), which consists of 4,131,541bp (G+C content of 40.3%) with two chromosomes, 3,538 protein-coding genes, 102 tRNAs and 8 rRNA operons. Several genes related to glycoside hydrolases, proteases, and bacteriolytic- and hemolytic activities were detected in the genome that help explain how the strain mediates degradation of algal cell wall and decomposes algal polysaccharides into industrially applicable products.
Keyword
Complete genomeGlycosidasesPacBio sequencingPseudoalteromonas issachenkonii
ISSN
0168-1656
Publisher
Elsevier
DOI
http://dx.doi.org/10.1016/j.jbiotec.2015.12.031
Type
Article
Appears in Collections:
Jeonbuk Branch Institute > Biological Resource Center > 1. Journal Articles
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