Detection and phylogenetic analysis of porcine deltacoronavirus in Korean swine farms, 2015

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dc.contributor.authorJ H Lee-
dc.contributor.authorH C CHung-
dc.contributor.authorV G Nguyen-
dc.contributor.authorH J Moon-
dc.contributor.authorHye Kwon Kim-
dc.contributor.authorS J Park-
dc.contributor.authorC H Lee-
dc.contributor.authorG E Lee-
dc.contributor.authorB K Park-
dc.date.accessioned2017-04-19T10:22:21Z-
dc.date.available2017-04-19T10:22:21Z-
dc.date.issued2016-
dc.identifier.issn1865-1674-
dc.identifier.uri10.1111/tbed.12490ko
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/13276-
dc.description.abstractThis study applied molecular-based method to investigate the presence of porcine deltacoronavirus (PDCoV) in 59 commercial pig farms in South Korea. The results of RT-PCR screening on a relatively large collection of faeces samples (n = 681) from January 2013 to March 2015 did not reveal the presence of PDCoV until the end of 2014. However, on March 2015, PDCoV-positive samples (SL2, SL5) were detected from SL swine farm in Gyeongbuk province. The phylogenetic trees based on the complete spike- and nucleocapsid protein-coding genes showed that SL2 and SL5 closely related to the US PDCoV strains rather than those in China. Thought Korean strains of PDCoV isolated in 2014 (KNU14.04) and in 2015 (SL2 and SL5) grouped within US PDCoV cluster, the reconstruction of ancestral amino acid changes suggested that they are different.-
dc.publisherWiley-
dc.titleDetection and phylogenetic analysis of porcine deltacoronavirus in Korean swine farms, 2015-
dc.title.alternativeDetection and phylogenetic analysis of porcine deltacoronavirus in Korean swine farms, 2015-
dc.typeArticle-
dc.citation.titleTransboundary and Emerging Diseases-
dc.citation.number3-
dc.citation.endPage252-
dc.citation.startPage248-
dc.citation.volume63-
dc.contributor.affiliatedAuthorHye Kwon Kim-
dc.contributor.alternativeName이지훈-
dc.contributor.alternativeName정희천-
dc.contributor.alternativeNameNguyen-
dc.contributor.alternativeName문형준-
dc.contributor.alternativeName김혜권-
dc.contributor.alternativeName박성준-
dc.contributor.alternativeName이찬희-
dc.contributor.alternativeName이가은-
dc.contributor.alternativeName박봉균-
dc.identifier.bibliographicCitationTransboundary and Emerging Diseases, vol. 63, no. 3, pp. 248-252-
dc.identifier.doi10.1111/tbed.12490-
dc.subject.keywordPorcine deltacoronavirus-
dc.subject.keywordSouth korea-
dc.subject.keywordSwine-
dc.subject.localPorcine deltacoronavirus-
dc.subject.localSouth Korea-
dc.subject.localSouth korea-
dc.subject.localswine-
dc.subject.localSwine-
dc.description.journalClassY-
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