Antibiotic-resistant bacteria present a global threat because the infections they cause are
di cult to treat. Therefore, it is highly important to develop advanced methods for the identification
of antibiotic resistance gene in the virulent bacteria. Here, we report the development of novel
nanoprobes for fluorescence in situ hybridization (FISH) and the application of the nanoprobe to
the detection of ampicillin-resistant Escherichia coli. The nanoprobe for FISH was synthesized by the
modified sol?gel chemistry and the synthesized nanoprobe provided strong fluorescent signals and
pH stability even under natural light condition. For the double-identification of bacteria species and
ampicillin-resistance with a single probe in situ, the nanoprobes were conjugated to the two kinds of
biotinylated probe DNAs; one for E. coli-species specific gene and the other for a drug-resistant gene.
By using the nanoprobe-DNA conjugants, we successfully detected the ampicillin-resistant E. coli
through the FISH technique. This result suggests the new insight into light stable FISH application of
the nanoprobe for a pathogenic antibiotic-resistance bacterium.