Plastome of Saraca asoca (Detarioideae, Fabaceae): annotation, comparison among subfamily and molecular typing

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Title
Plastome of Saraca asoca (Detarioideae, Fabaceae): annotation, comparison among subfamily and molecular typing
Author(s)
M A Ali; T K Pan; A B Gurung; M A Farah; F Al-Hemaid; K M Alanazi; M Elangbam; J Lee; S K Pandey; M O Rahman; Soo Yong Kim
Bibliographic Citation
Saudi Journal of Biological Sciences, vol. 28, no. 2, pp. 1487-1493
Publication Year
2021
Abstract
Saraca asoca (Roxb.) Willd. (subfamily Detarioideae, family Fabaceae) is a perennial evergreen sacred medicinal tree classified under ‘vulnerable’ by the IUCN. The chloroplast (cp) genome/plastome which follows uniparental inheritance contains many useful genetic information because of its conservative rate of evolution. The assembled cp genome of S. asoca which maps as a conserved circular structure revealed extensive rearrangement in gene organization, comprising total length 160,003 bp including LSC, SSC, IRa, and IRb, and GC content was 35.26%. Herein a set of rbcL and matK gene were established using molecular phylogenetic analyses for molecular typing of S. asoca.
Keyword
PlastomeSaraca asocaDetarioideaeFabaceaeMolecular authenticationSimple sequence repeatGenomic rearrangement
ISSN
1319-562X
Publisher
Elsevier
DOI
http://dx.doi.org/10.1016/j.sjbs.2020.12.008
Type
Article
Appears in Collections:
Ochang Branch Institute > Division of National Bio-Infrastructure > International Biological Material Research Center > 1. Journal Articles
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