Molecular evolution of dengue virus types 1 and 4 in Korean travelers

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Title
Molecular evolution of dengue virus types 1 and 4 in Korean travelers
Author(s)
Eun-Ha Hwang; Green Kim; Hoyin Chung; Hanseul Oh; J H Park; G H Hur; Jung Joo HongBon-Sang Koo
Bibliographic Citation
Archives of Virology, vol. 166, pp. 1103-1112
Publication Year
2021
Abstract
Dengue virus (DV) is a mosquito-borne virus that is endemic to many tropical and subtropical areas. Recently, the annual incidence of DV infection has increased worldwide, including in Korea, due to global warming and increased global travel. We therefore sought to characterize the molecular and evolutionary features of DV-1 and DV-4 isolated from Korean overseas travelers. We used phylogenetic analysis based on the full coding region to classify isolates of DV-1 in Korea into genotype I (43251, KP406802), genotype IV (KP406803), and genotype V (KP406801). In addition, we found that strains of DV-4 belonged to genotype I (KP406806) and genotype II (43257). Evidence of positive selection in DV-1 strains was identified in the C, prM, NS2A, and NS5 proteins, whereas DV-4 showed positive selection only in the non-structural proteins NS2A, NS3, and NS5. The substitution rates per site per year were 5.58 × 10-4 and 6.72 × 10-4 for DV-1 and DV-4, respectively, and the time of the most recent common ancestor was determined using the Bayesian skyline coalescent method. In this study, the molecular, phylogenetic, and evolutionary characteristics of Korean DV-1 and DV-4 isolates were evaluated for the first time.
ISSN
0304-8608
Publisher
Springer
DOI
http://dx.doi.org/10.1007/s00705-021-04973-8
Type
Article
Appears in Collections:
Ochang Branch Institute > Division of Bioinfrastructure > National Primate Research Center > 1. Journal Articles
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