Open Access@KRIBBDivision of Research on National ChallengesPlant Systems Engineering Research1. Journal Articles
The complete genome sequence of Stellaria aquatica virus A, a new member of the genus Alphacarmovirus, family Tombusviridae
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- Title
- The complete genome sequence of Stellaria aquatica virus A, a new member of the genus Alphacarmovirus, family Tombusviridae
- Author(s)
- Workitu Firomsa Gudeta; Se Eun Kim; H K Seo; J K Ahn; Jae Sun Moon; Y C Park
- Bibliographic Citation
- Archives of Virology, vol. 168, no. 3, pp. 90-90
- Publication Year
- 2023
- Abstract
- A new member of the genus Alphacarmovirus was detected in Stellaria aquatica using high-throughput RNA sequencing analysis. The complete genome sequence of this new virus isolate, tentatively named "Stellaria aquatica virus A" (StAV-A), comprises 4,017 nucleotides with five predicted open reading frames (ORFs) and has a typical alphacarmovirus genome organization. Pairwise comparison of StAV-A with selected members of family Tombusviridae showed 44-58%, 32-64%, and 19-49% sequence identity for the overall nucleotide sequence, polymerase, and coat protein, respectively. Phylogenetic analysis of polymerase sequences places StAV-A alongside other members of the genus Alphacarmovirus in the family Tombusviridae.
- ISSN
- 0304-8608
- Publisher
- Springer
- Full Text Link
- http://dx.doi.org/10.1007/s00705-022-05651-z
- Type
- Article
- Appears in Collections:
- Division of Research on National Challenges > Plant Systems Engineering Research > 1. Journal Articles
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