Determination of genome size and a preliminary physical map an extreme alkaliphile Micrococcus sp. Y-1 by pulsed-field gel electrophoresis

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dc.contributor.authorJong Hoon Park-
dc.contributor.authorJae-Chan Song-
dc.contributor.authorMyung Hee Kim-
dc.contributor.authorDae Sil Lee-
dc.contributor.authorChul Ho Kim-
dc.date.accessioned2017-04-19T08:44:27Z-
dc.date.available2017-04-19T08:44:27Z-
dc.date.issued1994-
dc.identifier.issn1350-0872-
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/3345-
dc.description.abstractLarge restriction fragments of genomic DNA from Micrococcus sp. Y-1 were separated by pulsed-field gel electrophoresis (PFGE). Since Micrococcus sp. Y-1 has a G+C content of approximately 70%, restriction fragments were obtained by digesting chromosomal DNA with endonucleases which recognize A+T-rich sequences. Five enzymes, SspI, SpeI, XbaI, HpaI and EcoRI, were used for generation of distinctly separated fragments in the size range 100-500 kb. No site for DraI was detected. In contrast, sites for 8-base-recognizing enzymes, but not for NotI and SfiI, were frequent. The genome size of Micrococcus sp. Y-1 was determined from restriction fragments separated by PFGE, and was estimated to be approximately 4061 kb. Partial digestion experiments revealed the order of the six SspI fragments on the chromosome.-
dc.publisherMicrobiology Soc-
dc.titleDetermination of genome size and a preliminary physical map an extreme alkaliphile Micrococcus sp. Y-1 by pulsed-field gel electrophoresis-
dc.title.alternativeDetermination of genome size and a preliminary physical map an extreme alkaliphile Micrococcus sp. Y-1 by pulsed-field gel electrophoresis-
dc.typeArticle-
dc.citation.titleMicrobiology-SGM-
dc.citation.number0-
dc.citation.endPage2250-
dc.citation.startPage2247-
dc.citation.volume140-
dc.contributor.affiliatedAuthorJong Hoon Park-
dc.contributor.affiliatedAuthorMyung Hee Kim-
dc.contributor.affiliatedAuthorDae Sil Lee-
dc.contributor.affiliatedAuthorChul Ho Kim-
dc.contributor.alternativeName박종훈-
dc.contributor.alternativeName송재찬-
dc.contributor.alternativeName김명희-
dc.contributor.alternativeName이대실-
dc.contributor.alternativeName김철호-
dc.identifier.bibliographicCitationMicrobiology-SGM, vol. 140, pp. 2247-2250-
dc.identifier.doi10.1099/13500872-140-9-2247-
dc.subject.keywordalkaliphile-
dc.subject.keywordgenome size-
dc.subject.keywordmicrococcus sp.-
dc.subject.localalkaliphile-
dc.subject.localgenome size-
dc.subject.localmicrococcus sp.-
dc.description.journalClassY-
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