SNP@Domain: a web resource of single nucleotide polymorphisms (SNPs) within protein domain structures and sequences

Cited 21 time in scopus
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dc.contributor.authorAreum Han-
dc.contributor.authorH J Kang-
dc.contributor.authorY Cho-
dc.contributor.authorSung Hoon Lee-
dc.contributor.authorYoung Joo Kim-
dc.contributor.authorSungsam Gong-
dc.date.accessioned2017-04-19T09:05:00Z-
dc.date.available2017-04-19T09:05:00Z-
dc.date.issued2006-
dc.identifier.issn0305-1048-
dc.identifier.uri10.1093/nar/gkl323ko
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/7540-
dc.description.abstractThe single nucleotide polymorphisms (SNPs) in conserved protein regions have been thought to be strong candidates that alter protein functions. Thus, we have developed SNPΔomain, a web resource, to identify SNPs within human protein domains. We annotated SNPs from dbSNP with protein structure-based as well as sequence-based domains: (i) structure-based using SCOP and (ii) sequence-based using Pfam to avoid conflicts from two domain assignment methodologies. Users can investigate SNPs within protein domains with 2D and 3D maps. We expect this visual annotation of SNPs within protein domains will help scientists select and interpret SNPs associated with diseases. A web interface for the SNPΔomain is freely available at http://snpnavigator.net/ and from http://bioportal.net/.-
dc.publisherOxford Univ Press-
dc.titleSNP@Domain: a web resource of single nucleotide polymorphisms (SNPs) within protein domain structures and sequences-
dc.title.alternativeSNP@Domain: a web resource of single nucleotide polymorphisms (SNPs) within protein domain structures and sequences-
dc.typeArticle-
dc.citation.titleNucleic Acids Research-
dc.citation.numberW-
dc.citation.endPageW644-
dc.citation.startPageW642-
dc.citation.volume34-
dc.contributor.affiliatedAuthorAreum Han-
dc.contributor.affiliatedAuthorSung Hoon Lee-
dc.contributor.affiliatedAuthorYoung Joo Kim-
dc.contributor.affiliatedAuthorSungsam Gong-
dc.contributor.alternativeName한아름-
dc.contributor.alternativeName강효진-
dc.contributor.alternativeName조유복-
dc.contributor.alternativeName이성훈-
dc.contributor.alternativeName김영주-
dc.contributor.alternativeName공성삼-
dc.identifier.bibliographicCitationNucleic Acids Research, vol. 34, no. W, pp. W642-W644-
dc.identifier.doi10.1093/nar/gkl323-
dc.description.journalClassY-
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