Bacterial, archaeal, and eukaryal diversity in the intestines of Korean people

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dc.contributor.authorYoung Do Nam-
dc.contributor.authorHo Won Chang-
dc.contributor.authorKyung Ho Kim-
dc.contributor.authorSung Un No-
dc.contributor.authorMin-Su Kim-
dc.contributor.authorMi-Ja Jung-
dc.contributor.authorS W Lee-
dc.contributor.authorJ Y Kim-
dc.contributor.authorJung-Hoon Yoon-
dc.contributor.authorJin-Woo Bae-
dc.date.accessioned2017-04-19T09:12:00Z-
dc.date.available2017-04-19T09:12:00Z-
dc.date.issued2008-
dc.identifier.issn1225-8873-
dc.identifier.uri10.1007/s12275-008-0199-7ko
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/8653-
dc.description.abstractThe bacterial, archaeal, and eukaryal diversity in fecal samples from ten Koreans were analyzed and compared by using the PCR-fingerprinting method, denaturing gradient gel electrophoresis (DGGE). The bacteria all belonged to the Firmicutes and Bacteroidetes phyla, which were known to be the dominant bacterial species in the human intestine. Most of the archaeal sequences belonged to the methane-producing archaea but several halophilic archarea-related sequences were also detected unexpectedly. While a small number of eukaryal sequences were also detected upon DGGE analysis, these sequences were related to fungi and stramenopiles (Blastocystis hominis). With regard to the bacterial and archaeal DGGE analysis, all ten samples had one and two prominent bands, respectively, but many individual-specific bands were also observed. However, only five of the ten samples had small eukaryal DGGE bands and none of these bands was observed in all five samples. Unweighted pair group method and arithmetic averages clustering algorithm (UPGMA) clustering analysis revealed that the archaeal and bacterial communities in the ten samples had relatively higher relatedness (the average Dice coefficient values were 68.9 and 59.2% for archaea and bacteria, respectively) but the eukaryal community showed low relatedness (39.6%).-
dc.publisherMicrobiological Society Korea-
dc.titleBacterial, archaeal, and eukaryal diversity in the intestines of Korean people-
dc.title.alternativeBacterial, archaeal, and eukaryal diversity in the intestines of Korean people-
dc.typeArticle-
dc.citation.titleJournal of Microbiology-
dc.citation.number5-
dc.citation.endPage501-
dc.citation.startPage491-
dc.citation.volume46-
dc.contributor.affiliatedAuthorYoung Do Nam-
dc.contributor.affiliatedAuthorHo Won Chang-
dc.contributor.affiliatedAuthorKyung Ho Kim-
dc.contributor.affiliatedAuthorSung Un No-
dc.contributor.affiliatedAuthorMin-Su Kim-
dc.contributor.affiliatedAuthorMi-Ja Jung-
dc.contributor.affiliatedAuthorJung-Hoon Yoon-
dc.contributor.affiliatedAuthorJin-Woo Bae-
dc.contributor.alternativeName남영도-
dc.contributor.alternativeName장호원-
dc.contributor.alternativeName김경호-
dc.contributor.alternativeName노성운-
dc.contributor.alternativeName김민수-
dc.contributor.alternativeName정미자-
dc.contributor.alternativeName이시우-
dc.contributor.alternativeName김종열-
dc.contributor.alternativeName윤정훈-
dc.contributor.alternativeName배진우-
dc.identifier.bibliographicCitationJournal of Microbiology, vol. 46, no. 5, pp. 491-501-
dc.identifier.doi10.1007/s12275-008-0199-7-
dc.subject.keywordArchaea-
dc.subject.keywordBacteria-
dc.subject.keywordDGGE-
dc.subject.keywordEukaryote-
dc.subject.keywordHuman intestinal microbes-
dc.subject.keywordUPGMA-
dc.subject.localArchaea-
dc.subject.localarchaea-
dc.subject.localbacteria-
dc.subject.localBacteria-
dc.subject.localbacteria (microorganisms)-
dc.subject.localDGGE (denaturing gradient gel electrophoresis)-
dc.subject.localDGGE-
dc.subject.localeukaryotes-
dc.subject.localEukaryote-
dc.subject.localHuman intestinal microbes-
dc.subject.localUPGMA-
dc.subject.localUPGMA.-
dc.description.journalClassY-
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