Transcriptional profiling of ESTs responsive to Rhizobium vitis from 'Tamnara' grapevines (Vitis sp.)

Cited 8 time in scopus
Metadata Downloads

Full metadata record

DC FieldValueLanguage
dc.contributor.authorY J Choi-
dc.contributor.authorH K Yun-
dc.contributor.authorK S Park-
dc.contributor.authorJ H Noh-
dc.contributor.authorY Y Heo-
dc.contributor.authorS H Kim-
dc.contributor.authorDae Won Kim-
dc.contributor.authorH J Lee-
dc.date.accessioned2017-04-19T09:19:27Z-
dc.date.available2017-04-19T09:19:27Z-
dc.date.issued2010-
dc.identifier.issn0176-1617-
dc.identifier.uri10.1016/j.jplph.2010.02.005ko
dc.identifier.urihttps://oak.kribb.re.kr/handle/201005/9671-
dc.description.abstractGenes related with defense responses were screened from the cDNA library constructed with Rhizobium vitis-inoculated or salicylic acid (SA)-treated 'Tamnara' grapevine (Vitis sp.) leaves. Among 13,728 expressed sequence tags (ESTs) from 'Tamnara' grapevine upon R. vitis inoculation and SA treatment, 6776 unigenes containing 1915 contigs and 4860 singletons were obtained. In gene ontology analysis, there were about 3200 clones related with biological process, 3555 with molecular function, and 3354 with cellular component genes. Proteins of secretory organ (35%), plasma membrane (30%), endoplasmic reticulum (20%), and vacuole (11%) were predicted. Photosynthesis-related genes and defense-related genes were most abundant. Among ESTs, 199 resistance-related ones were mapped to the genome of Vitis vinifera L. with three markers, GLP1-12, MHD98, and MHD145, which are known to be linked to resistance against powdery mildew. Approximately, 120 simple sequence repeats (SSRs) detected in cDNAs could be used as EST-derived SSR markers in disease resistant grape breeding.-
dc.publisherElsevier-
dc.titleTranscriptional profiling of ESTs responsive to Rhizobium vitis from 'Tamnara' grapevines (Vitis sp.)-
dc.title.alternativeTranscriptional profiling of ESTs responsive to Rhizobium vitis from 'Tamnara' grapevines (Vitis sp.)-
dc.typeArticle-
dc.citation.titleJournal of Plant Physiology-
dc.citation.number13-
dc.citation.endPage1092-
dc.citation.startPage1084-
dc.citation.volume167-
dc.contributor.affiliatedAuthorDae Won Kim-
dc.contributor.alternativeName최윤정-
dc.contributor.alternativeName윤해근-
dc.contributor.alternativeName박교선-
dc.contributor.alternativeName노정호-
dc.contributor.alternativeName허윤영-
dc.contributor.alternativeName김승희-
dc.contributor.alternativeName김대원-
dc.contributor.alternativeName이희재-
dc.identifier.bibliographicCitationJournal of Plant Physiology, vol. 167, no. 13, pp. 1084-1092-
dc.identifier.doi10.1016/j.jplph.2010.02.005-
dc.subject.keywordCrown gall disease-
dc.subject.keywordDefense response genes-
dc.subject.keywordEST mapping-
dc.subject.keywordEST-derived SSR markers-
dc.subject.localCrown gall disease-
dc.subject.localDefense response genes-
dc.subject.localEST mapping-
dc.subject.localEST-derived SSR markers-
dc.description.journalClassY-
Appears in Collections:
1. Journal Articles > Journal Articles
Files in This Item:
  • There are no files associated with this item.


Items in OpenAccess@KRIBB are protected by copyright, with all rights reserved, unless otherwise indicated.